Research workbench
AlphaFold monomer V2.0 prediction for photosystem II CP47 reaction center protein (A4QJE1)
Analyse AlphaFold monomer V2.0 prediction for photosystem II CP47 reaction center… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QJE1
- Type
- protein
- Length
- 508 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0E8aFD1b9aD0b2b3eaF3cd051DEbE3cDB0a2a1C7
- Molecule
- Photosystem II CP47 reaction center protein
- UniProt
- A4QJE1
- Pockets
- 10 · best druggability 0.53
Structure
1 distinct chain · 47% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II CP47 reaction center protein | protein | 508 | 47% helix, 10% strand | A4QJE1 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.53 | 0.79 | 23 | empty |
| 2 | 262 | 0.52 | 0.74 | 27 | empty |
| 3 | 114 | 0.51 | 0.82 | 25 | empty |
| 4 | 168 | 0.44 | 0.75 | 25 | empty |
| 5 | 119 | 0.39 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QJE1
- Elsewhere: UniProt A4QJE1 · AlphaFold DB A4QJE1
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