Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A0T0W2)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A0T0W2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0T0W2
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x431B390Bd1BB4D49138DB71A9E1d789A246f702e
- Molecule
- Photosystem II protein D1
- UniProt
- A0T0W2
- Pockets
- 4 · best druggability 0.70
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 360 | 58% helix, 3% strand | A0T0W2 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 590 | 0.70 | 0.79 | 66 | empty |
| 2 | 81 | 0.63 | 0.90 | 21 | empty |
| 3 | 169 | 0.47 | 0.75 | 21 | empty |
| 4 | 54 | 0.27 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0T0W2
- Elsewhere: UniProt A0T0W2 · AlphaFold DB A0T0W2
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