Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q32RX1)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q32RX1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q32RX1
- Type
- protein
- Length
- 344 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x319B1eD445AeE5afd4553C8a0cC7A993708454bC
- Molecule
- Photosystem II protein D1
- UniProt
- Q32RX1
- Pockets
- 4 · best druggability 0.62
Structure
1 distinct chain · 60% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 344 | 60% helix, 3% strand | Q32RX1 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.62 | 0.89 | 17 | empty |
| 2 | 277 | 0.61 | 0.80 | 41 | empty |
| 3 | 151 | 0.43 | 0.74 | 20 | empty |
| 4 | 129 | 0.40 | 0.75 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32RX1
- Elsewhere: UniProt Q32RX1 · AlphaFold DB Q32RX1
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