Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q46JV2)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 (Q46JV2) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q46JV2
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7A4835E1d5C827cCdBb787F0BA47F7B72797C5bb
- Molecule
- Photosystem II protein D1
- UniProt
- Q46JV2
- Pockets
- 3 · best druggability 0.67
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 360 | 58% helix, 3% strand | Q46JV2 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 535 | 0.67 | 0.78 | 60 | empty |
| 2 | 85 | 0.65 | 0.90 | 18 | empty |
| 3 | 181 | 0.48 | 0.76 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46JV2
- Elsewhere: UniProt Q46JV2 · AlphaFold DB Q46JV2
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