Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (P35860)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 (P35860) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P35860
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x71112d4fF7ebb3b617963c05f052289e073082FD
- Molecule
- Photosystem II protein D1
- UniProt
- P35860
- Pockets
- 3 · best druggability 0.66
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 352 | 59% helix, 3% strand | P35860 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 475 | 0.66 | 0.78 | 63 | empty |
| 2 | 75 | 0.61 | 0.89 | 17 | empty |
| 3 | 163 | 0.45 | 0.74 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35860
- Elsewhere: UniProt P35860 · AlphaFold DB P35860
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