Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A4QJ96)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 (A4QJ96) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4QJ96
- Type
- protein
- Length
- 353 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4fc379d65A6A09b9D0cEF948D61447D3D1509D93
- Molecule
- Photosystem II protein D1
- UniProt
- A4QJ96
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 59% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 | protein | 353 | 59% helix, 3% strand | A4QJ96 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 482 | 0.65 | 0.77 | 61 | empty |
| 2 | 89 | 0.63 | 0.89 | 19 | empty |
| 3 | 133 | 0.43 | 0.75 | 22 | empty |
| 4 | 51 | 0.26 | 0.73 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4QJ96
- Elsewhere: UniProt A4QJ96 · AlphaFold DB A4QJ96
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