Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 3 (Q2JTM8)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 3 (Q2JTM8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2JTM8
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x671C4a5236beCb236f88B9ec9861C01F9D561f42
- Molecule
- Photosystem II protein D1 3
- UniProt
- Q2JTM8
- Pockets
- 5 · best druggability 0.65
Structure
1 distinct chain · 56% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 3 | protein | 354 | 56% helix, 3% strand | Q2JTM8 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.65 | 0.91 | 17 | empty |
| 2 | 415 | 0.65 | 0.79 | 51 | empty |
| 3 | 172 | 0.46 | 0.74 | 21 | empty |
| 4 | 67 | 0.33 | 0.75 | 12 | empty |
| 5 | 69 | 0.31 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2JTM8
- Elsewhere: UniProt Q2JTM8 · AlphaFold DB Q2JTM8
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