Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 3 (Q8YQS7)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 3 (Q8YQS7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8YQS7
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6Ed09D80e98fE15DE51C9E7a8896AbF1f2365C3e
- Molecule
- Photosystem II protein D1 3
- UniProt
- Q8YQS7
- Pockets
- 4 · best druggability 0.64
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 3 | protein | 360 | 58% helix, 3% strand | Q8YQS7 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 441 | 0.64 | 0.77 | 51 | empty |
| 2 | 70 | 0.61 | 0.90 | 19 | empty |
| 3 | 178 | 0.51 | 0.77 | 22 | empty |
| 4 | 60 | 0.29 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YQS7
- Elsewhere: UniProt Q8YQS7 · AlphaFold DB Q8YQS7
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