Research workbench
AlphaFold monomer V2.0 prediction for photosystem II protein D1 1 (Q3MCT0)
Analyse AlphaFold monomer V2.0 prediction for photosystem II protein D1 1 (Q3MCT0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3MCT0
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA91f62865d77796ecce8F77c3819DD7f3122E46D
- Molecule
- Photosystem II protein D1 1
- UniProt
- Q3MCT0
- Pockets
- 4 · best druggability 0.65
Structure
1 distinct chain · 58% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem II protein D1 1 | protein | 360 | 58% helix, 3% strand | Q3MCT0 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 463 | 0.65 | 0.78 | 61 | empty |
| 2 | 76 | 0.64 | 0.91 | 17 | empty |
| 3 | 169 | 0.48 | 0.76 | 25 | empty |
| 4 | 53 | 0.28 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3MCT0
- Elsewhere: UniProt Q3MCT0 · AlphaFold DB Q3MCT0
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