Research workbench
AlphaFold monomer V2.0 prediction for photosystem I reaction center subunit II, chloroplastic (Q39615)
Analyse AlphaFold monomer V2.0 prediction for photosystem I reaction center subunit II… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q39615
- Type
- protein
- Length
- 196 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Photosystem I reaction center subunit II, chloroplastic
- UniProt
- Q39615
- Pockets
- 1 · best druggability 0.35
Structure
1 distinct chain · 13% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem I reaction center subunit II, chloroplastic | protein | 196 | 13% helix, 17% strand | Q39615 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.35 | 0.76 | 18 | empty |
Compared structures
- 7O01 · Dimeric photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7O01 · Dimeric Photosystem I of a temperature sensitive mutant Chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7BGI · Photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7BGI · Photosystem I of a temperature sensitive mutant Chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7ZQC · Monomeric PSI of Chlamydomonas reinhardtii at 2.31 A resolution · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7R3K · Chlamydomonas reinhardtii TSP9 mutant small Photosystem I complex · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 7BLX · Photosystem I of a temperature sensitive mutant chlamydomonas reinhardtii · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 6JO6 · Structure of the green algal photosystem I supercomplex with light- harvesting complex I · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 6JO6 · Structure of the green algal photosystem I supercomplex with light-harvesting complex I · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 6JO5 · Structure of the green algal photosystem I supercomplex with light-harvesting complex I · an experimental structure of the same protein · chain A against D, TM-score 0.73
- 6JO5 · Structure of the green algal photosystem I supercomplex with light- harvesting complex I · an experimental structure of the same protein · chain A against D, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q39615
- Elsewhere: UniProt Q39615 · AlphaFold DB Q39615
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