Research workbench
AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (Q3AMS5)
Analyse AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3AMS5
- Type
- protein
- Length
- 767 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Photosystem I P700 chlorophyll a apoprotein A1
- UniProt
- Q3AMS5
- Pockets
- 10 · best druggability 0.66
Structure
1 distinct chain · 60% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem I P700 chlorophyll a apoprotein A1 | protein | 767 | 60% helix, 5% strand | Q3AMS5 |
Pockets
10 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 651 | 0.66 | 0.75 | 75 | empty |
| 2 | 395 | 0.64 | 0.78 | 55 | empty |
| 3 | 253 | 0.59 | 0.78 | 36 | empty |
| 4 | 193 | 0.57 | 0.79 | 25 | empty |
| 5 | 219 | 0.53 | 0.76 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3AMS5
- Elsewhere: UniProt Q3AMS5 · AlphaFold DB Q3AMS5
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