Research workbench
AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a apoprotein A1 (Q5N0D6)
Analyse AlphaFold monomer V2.0 prediction for photosystem I P700 chlorophyll a… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5N0D6
- Type
- protein
- Length
- 763 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Photosystem I P700 chlorophyll a apoprotein A1
- UniProt
- Q5N0D6
- Pockets
- 10 · best druggability 0.69
Structure
1 distinct chain · 60% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Photosystem I P700 chlorophyll a apoprotein A1 | protein | 763 | 60% helix, 6% strand | Q5N0D6 |
Pockets
10 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 819 | 0.69 | 0.75 | 66 | empty |
| 2 | 645 | 0.68 | 0.76 | 62 | empty |
| 3 | 303 | 0.55 | 0.75 | 36 | empty |
| 4 | 238 | 0.54 | 0.76 | 35 | empty |
| 5 | 238 | 0.53 | 0.76 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5N0D6
- Elsewhere: UniProt Q5N0D6 · AlphaFold DB Q5N0D6
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