Research workbench
AlphaFold monomer V2.0 prediction for proteasome subunit alpha type-5 (Q9Z2U1)
Analyse AlphaFold monomer V2.0 prediction for proteasome subunit alpha type-5 (Q9Z2U1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Z2U1
- Type
- protein
- Length
- 241 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbDA05C32aD6eE153C8C5A78dfa48d7Ba25694fea
- Molecule
- Proteasome subunit alpha type-5
- UniProt
- Q9Z2U1
- Pockets
- 2 · best druggability 0.32
Structure
1 distinct chain · 36% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteasome subunit alpha type-5 | protein | 241 | 36% helix, 24% strand | Q9Z2U1 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 63 | 0.32 | 0.76 | 13 | empty |
| 2 | 54 | 0.26 | 0.73 | 17 | empty |
Compared structures
- 3UNB · Mouse constitutive 20S proteasome in complex with pr-957 · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNB · Mouse constitutive 20S proteasome in complex with PR-957 · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNE · Mouse constitutive 20S proteasome · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNE · Mouse constitutive 20S proteasome · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNF · Mouse 20S immunoproteasome in complex with pr-957 · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNF · Mouse 20S immunoproteasome in complex with PR-957 · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNH · Mouse 20S immunoproteasome · an experimental structure of the same protein · chain A against D, TM-score 0.93
- 3UNH · Mouse 20S immunoproteasome · an experimental structure of the same protein · chain A against D, TM-score 0.93
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Z2U1
- Elsewhere: UniProt Q9Z2U1 · AlphaFold DB Q9Z2U1
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