Research workbench
AlphaFold monomer V2.0 prediction for protogenin B (Q2EY13)
Analyse AlphaFold monomer V2.0 prediction for protogenin B (Q2EY13) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2EY13
- Type
- protein
- Length
- 1,069 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x78Cc7f9BF18AF8279e492D45EE7Fe9d7cC6f6D07
- Molecule
- Protogenin B
- UniProt
- Q2EY13
- Pockets
- 7 · best druggability 0.61
Structure
1 distinct chain · 6% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protogenin B | protein | 1069 | 6% helix, 42% strand | Q2EY13 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 461 | 0.61 | 0.76 | 48 | empty |
| 2 | 122 | 0.44 | 0.77 | 21 | empty |
| 3 | 166 | 0.43 | 0.74 | 37 | empty |
| 4 | 121 | 0.41 | 0.75 | 20 | empty |
| 5 | 114 | 0.40 | 0.76 | 20 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2EY13
- Elsewhere: UniProt Q2EY13 · AlphaFold DB Q2EY13
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