Research workbench
AlphaFold monomer V2.0 prediction for scytalidopepsin B (P15369)
Analyse AlphaFold monomer V2.0 prediction for scytalidopepsin B (P15369) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P15369
- Type
- protein
- Length
- 260 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Scytalidopepsin B
- UniProt
- P15369
- Pockets
- 2 · best druggability 0.79
Structure
1 distinct chain · 5% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Scytalidopepsin B | protein | 260 | 5% helix, 48% strand | P15369 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 320 | 0.79 | 0.90 | 44 | empty |
| 2 | 83 | 0.35 | 0.75 | 19 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Compared structures
- 2IFW · Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 2IFW · Crystal structure of scytalido-glutamic peptidase with a transition state analog inhibitor · an experimental structure of the same protein · chain A against A, TM-score 0.78
- 2IFR · Crystal structure of scytalido-glutamic peptidase with a peptide based transition state… · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 2IFR · Crystal structure of Scytalido-glutamic peptidase with a peptide based transition state… · an experimental structure of the same protein · chain A against A, TM-score 0.77
- 1S2K · Structure of SCP-B a member of the Eqolisin family of Peptidases in a complex with a… · an experimental structure of the same protein · chain A against A, TM-score 0.76
- 1S2K · Structure of scp-B a member of the eqolisin family of peptidases in a complex with a… · an experimental structure of the same protein · chain A against A, TM-score 0.76
- 1S2B · Structure of SCP-B the first member of the Eqolisin family of Peptidases to have its… · an experimental structure of the same protein · chain A against A, TM-score 0.76
- 1S2B · Structure of scp-B the first member of the eqolisin family of peptidases to have its… · an experimental structure of the same protein · chain A against A, TM-score 0.76
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15369
- Elsewhere: UniProt P15369 · AlphaFold DB P15369
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