Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 6 (A1A5S1)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 6 (A1A5S1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1A5S1
- Type
- protein
- Length
- 941 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Pre-mRNA-processing factor 6
- UniProt
- A1A5S1
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 64% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-processing factor 6 | protein | 941 | 64% helix, 1% strand | A1A5S1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1154 | 0.78 | 0.80 | 89 | empty |
| 2 | 80 | 0.39 | 0.78 | 16 | empty |
| 3 | 89 | 0.36 | 0.75 | 17 | empty |
| 4 | 61 | 0.33 | 0.76 | 12 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1A5S1
- Elsewhere: UniProt A1A5S1 · AlphaFold DB A1A5S1
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