Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-processing ATP- dependent RNA helicase PRP5 (Q6CKI1)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-processing ATP- dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6CKI1
- Type
- protein
- Length
- 812 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA55fA446aDFd185F1deb3281162E4D0d9a8056F7
- Molecule
- Pre-mRNA-processing ATP-dependent RNA helicase PRP5
- UniProt
- Q6CKI1
- Pockets
- 6 · best druggability 0.75
Structure
1 distinct chain · 43% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-processing ATP-dependent RNA helicase PRP5 | protein | 812 | 43% helix, 12% strand | Q6CKI1 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 877 | 0.75 | 0.79 | 70 | empty |
| 2 | 322 | 0.65 | 0.81 | 38 | empty |
| 3 | 274 | 0.51 | 0.74 | 28 | empty |
| 4 | 166 | 0.50 | 0.78 | 27 | empty |
| 5 | 107 | 0.41 | 0.76 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6CKI1
- Elsewhere: UniProt Q6CKI1 · AlphaFold DB Q6CKI1
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