Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-processing ATP- dependent RNA helicase PRP5 (P0CQ98)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-processing ATP- dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0CQ98
- Type
- protein
- Length
- 1,072 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- Pre-mRNA-processing ATP-dependent RNA helicase PRP5
- UniProt
- P0CQ98
- Pockets
- 10 · best druggability 0.69
Structure
1 distinct chain · 43% helix, 8% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-processing ATP-dependent RNA helicase PRP5 | protein | 1072 | 43% helix, 8% strand | P0CQ98 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 375 | 0.69 | 0.82 | 56 | empty |
| 2 | 688 | 0.66 | 0.75 | 43 | empty |
| 3 | 426 | 0.63 | 0.77 | 55 | empty |
| 4 | 141 | 0.47 | 0.78 | 17 | empty |
| 5 | 79 | 0.39 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CQ98
- Elsewhere: UniProt P0CQ98 · AlphaFold DB P0CQ98
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