Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (Q6C024)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6C024
- Type
- protein
- Length
- 575 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
- UniProt
- Q6C024
- Pockets
- 6 · best druggability 0.60
Structure
1 distinct chain · 43% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 | protein | 575 | 43% helix, 12% strand | Q6C024 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 295 | 0.60 | 0.78 | 47 | empty |
| 2 | 217 | 0.57 | 0.80 | 27 | empty |
| 3 | 65 | 0.45 | 0.83 | 15 | empty |
| 4 | 90 | 0.39 | 0.77 | 15 | empty |
| 5 | 71 | 0.36 | 0.77 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6C024
- Elsewhere: UniProt Q6C024 · AlphaFold DB Q6C024
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