Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (Q9Y7T7)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y7T7
- Type
- protein
- Length
- 662 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7d3F8Df98067F4f9E1c48c9318F80d34BF5B4923
- Molecule
- Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
- UniProt
- Q9Y7T7
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 48% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 | protein | 662 | 48% helix, 10% strand | Q9Y7T7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 713 | 0.75 | 0.81 | 71 | empty |
| 2 | 61 | 0.36 | 0.78 | 10 | empty |
| 3 | 56 | 0.27 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y7T7
- Elsewhere: UniProt Q9Y7T7 · AlphaFold DB Q9Y7T7
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