Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA helicase prp-28 (Q7SEL0)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7SEL0
- Type
- protein
- Length
- 728 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Pre-mRNA-splicing ATP-dependent RNA helicase prp-28
- UniProt
- Q7SEL0
- Pockets
- 8 · best druggability 0.58
Structure
1 distinct chain · 43% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 | protein | 728 | 43% helix, 9% strand | Q7SEL0 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 208 | 0.58 | 0.80 | 36 | empty |
| 2 | 206 | 0.58 | 0.81 | 31 | empty |
| 3 | 63 | 0.50 | 0.85 | 16 | empty |
| 4 | 91 | 0.42 | 0.78 | 15 | empty |
| 5 | 116 | 0.40 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7SEL0
- Elsewhere: UniProt Q7SEL0 · AlphaFold DB Q7SEL0
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