Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (Q2HEB0)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-splicing ATP-dependent RNA… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q2HEB0
- Type
- protein
- Length
- 705 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6b7093847d131cA54365434A74779E95dc6BB401
- Molecule
- Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
- UniProt
- Q2HEB0
- Pockets
- 5 · best druggability 0.64
Structure
1 distinct chain · 46% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 | protein | 705 | 46% helix, 10% strand | Q2HEB0 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 351 | 0.64 | 0.79 | 48 | empty |
| 2 | 211 | 0.57 | 0.80 | 30 | empty |
| 3 | 99 | 0.35 | 0.74 | 20 | empty |
| 4 | 58 | 0.34 | 0.78 | 13 | empty |
| 5 | 56 | 0.25 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2HEB0
- Elsewhere: UniProt Q2HEB0 · AlphaFold DB Q2HEB0
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