Research workbench
AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 17 (Q9DC48)
Analyse AlphaFold monomer V2.0 prediction for pre-mRNA-processing factor 17 (Q9DC48) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9DC48
- Type
- protein
- Length
- 579 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6154deB236274613b612033257012c25F7431808
- Molecule
- Pre-mRNA-processing factor 17
- UniProt
- Q9DC48
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 9% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pre-mRNA-processing factor 17 | protein | 579 | 9% helix, 30% strand | Q9DC48 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 778 | 0.78 | 0.82 | 60 | empty |
| 2 | 147 | 0.51 | 0.79 | 22 | empty |
| 3 | 92 | 0.43 | 0.78 | 16 | empty |
| 4 | 85 | 0.39 | 0.77 | 19 | empty |
| 5 | 58 | 0.31 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9DC48
- Elsewhere: UniProt Q9DC48 · AlphaFold DB Q9DC48
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