Research workbench
AlphaFold monomer V2.0 prediction for DNA primase small subunit (P20664)
Analyse AlphaFold monomer V2.0 prediction for DNA primase small subunit (P20664) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P20664
- Type
- protein
- Length
- 417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD3b8819A3F790D4BE519d2a8cD537B78d83834d4
- Molecule
- DNA primase small subunit
- UniProt
- P20664
- Pockets
- 8 · best druggability 0.53
Structure
1 distinct chain · 52% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA primase small subunit | protein | 417 | 52% helix, 11% strand | P20664 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 71 | 0.53 | 0.86 | 20 | empty |
| 2 | 130 | 0.49 | 0.79 | 16 | empty |
| 3 | 147 | 0.42 | 0.75 | 21 | empty |
| 4 | 73 | 0.31 | 0.74 | 15 | empty |
| 5 | 68 | 0.31 | 0.74 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P20664
- Elsewhere: UniProt P20664 · AlphaFold DB P20664
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