Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT1G34160 (Q9FX24)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FX24
- Type
- protein
- Length
- 581 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Pentatricopeptide repeat-containing protein AT1G34160
- UniProt
- Q9FX24
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 65% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT1G34160 | protein | 581 | 65% helix, 5% strand | Q9FX24 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1133 | 0.74 | 0.77 | 86 | empty |
| 2 | 235 | 0.57 | 0.78 | 33 | empty |
| 3 | 88 | 0.47 | 0.81 | 20 | empty |
| 4 | 50 | 0.37 | 0.80 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FX24
- Elsewhere: UniProt Q9FX24 · AlphaFold DB Q9FX24
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