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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT1G15510, chloroplastic (Q9M9E2)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9M9E2
- Type
- protein
- Length
- 866 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x46EfCa788d03A3e879DAcDb96552AB8Bbc7e20b3
- Molecule
- Pentatricopeptide repeat-containing protein AT1G15510, chloroplastic
- UniProt
- Q9M9E2
- Pockets
- 8 · best druggability 0.66
Structure
1 distinct chain · 64% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT1G15510, chloroplastic | protein | 866 | 64% helix, 3% strand | Q9M9E2 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 553 | 0.66 | 0.77 | 58 | empty |
| 2 | 116 | 0.55 | 0.83 | 29 | empty |
| 3 | 188 | 0.55 | 0.79 | 25 | empty |
| 4 | 57 | 0.36 | 0.79 | 14 | empty |
| 5 | 58 | 0.33 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9M9E2
- Elsewhere: UniProt Q9M9E2 · AlphaFold DB Q9M9E2
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