Research workbench
AlphaFold monomer V2.0 prediction for polyphosphate kinase (A0PQ00)
Analyse AlphaFold monomer V2.0 prediction for polyphosphate kinase (A0PQ00) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A0PQ00
- Type
- protein
- Length
- 738 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Polyphosphate kinase
- UniProt
- A0PQ00
- Pockets
- 8 · best druggability 0.81
Structure
1 distinct chain · 37% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyphosphate kinase | protein | 738 | 37% helix, 21% strand | A0PQ00 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1048 | 0.81 | 0.82 | 103 | empty |
| 2 | 244 | 0.51 | 0.75 | 32 | empty |
| 3 | 188 | 0.50 | 0.76 | 26 | empty |
| 4 | 73 | 0.45 | 0.81 | 14 | empty |
| 5 | 62 | 0.43 | 0.82 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0PQ00
- Elsewhere: UniProt A0PQ00 · AlphaFold DB A0PQ00
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