Research workbench
AlphaFold monomer V2.0 prediction for polyphosphate kinase (O25654)
Analyse AlphaFold monomer V2.0 prediction for polyphosphate kinase (O25654) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O25654
- Type
- protein
- Length
- 675 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6E824d26b2Fa9e5c47e2ED51a103b843F3BD8906
- Molecule
- Polyphosphate kinase
- UniProt
- O25654
- Pockets
- 8 · best druggability 0.80
Structure
1 distinct chain · 41% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyphosphate kinase | protein | 675 | 41% helix, 24% strand | O25654 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1103 | 0.80 | 0.81 | 107 | empty |
| 2 | 210 | 0.59 | 0.80 | 23 | empty |
| 3 | 92 | 0.43 | 0.79 | 21 | empty |
| 4 | 152 | 0.43 | 0.75 | 20 | empty |
| 5 | 103 | 0.37 | 0.74 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O25654
- Elsewhere: UniProt O25654 · AlphaFold DB O25654
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