Research workbench
AlphaFold monomer V2.0 prediction for polyphosphate kinase (B1YL94)
Analyse AlphaFold monomer V2.0 prediction for polyphosphate kinase (B1YL94) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1YL94
- Type
- protein
- Length
- 719 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4d07E6a23DeB6B95bd9b90EcB67368b7e8D3B77e
- Molecule
- Polyphosphate kinase
- UniProt
- B1YL94
- Pockets
- 9 · best druggability 0.78
Structure
1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polyphosphate kinase | protein | 719 | 40% helix, 22% strand | B1YL94 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 868 | 0.78 | 0.81 | 88 | empty |
| 2 | 117 | 0.48 | 0.79 | 15 | empty |
| 3 | 116 | 0.45 | 0.78 | 21 | empty |
| 4 | 116 | 0.44 | 0.78 | 20 | empty |
| 5 | 109 | 0.39 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1YL94
- Elsewhere: UniProt B1YL94 · AlphaFold DB B1YL94
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