Research workbench
AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase PPI1 (P87051)
Analyse AlphaFold monomer V2.0 prediction for peptidyl-prolyl cis-trans isomerase PPI1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P87051
- Type
- protein
- Length
- 155 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- Peptidyl-prolyl cis-trans isomerase PPI1
- UniProt
- P87051
- Pockets
- 1 · best druggability 0.32
Structure
1 distinct chain · 14% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Peptidyl-prolyl cis-trans isomerase PPI1 | protein | 155 | 14% helix, 32% strand | P87051 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 69 | 0.32 | 0.75 | 19 | empty |
Compared structures
- 3JB9 · Cryo-EM structure of the yeast spliceosome at 3.6 angstrom resolution · an experimental structure of the same protein · chain A against d, TM-score 0.98
- 3JB9 · Cryo-EM structure of the yeast spliceosome at 3.6 ångström resolution · an experimental structure of the same protein · chain A against d, TM-score 0.98
- 9ESI · Structure of a B-state intermediate committed to discard (Bd-II state) · an experimental structure of the same protein · chain A against d, TM-score 0.97
- 9ESH · Structure of a B-state intermediate committed to discard (Bd-I state) · an experimental structure of the same protein · chain A against d, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P87051
- Elsewhere: UniProt P87051 · AlphaFold DB P87051
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