Research workbench
AlphaFold monomer V2.0 prediction for putative thylakoid lumen peptidyl-prolyl cis-trans isomerase SLL0408 (Q55118)
Analyse AlphaFold monomer V2.0 prediction for putative thylakoid lumen peptidyl-prolyl… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q55118
- Type
- protein
- Length
- 379 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xbff27Dc0a932A6E0d9Fe883AAbD1BF27bB95A69F
- Molecule
- Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase SLL0408
- UniProt
- Q55118
- Pockets
- 6 · best druggability 0.60
Structure
1 distinct chain · 35% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative thylakoid lumen peptidyl-prolyl cis-trans isomerase SLL0408 | protein | 379 | 35% helix, 16% strand | Q55118 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 247 | 0.60 | 0.80 | 32 | empty |
| 2 | 192 | 0.49 | 0.76 | 27 | empty |
| 3 | 115 | 0.36 | 0.73 | 24 | empty |
| 4 | 54 | 0.32 | 0.77 | 18 | empty |
| 5 | 72 | 0.31 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55118
- Elsewhere: UniProt Q55118 · AlphaFold DB Q55118
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