Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G44230 (Q9FFG8)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FFG8
- Type
- protein
- Length
- 657 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xe7fD32F422856e69Be28729279A8EB596328C29B
- Molecule
- Pentatricopeptide repeat-containing protein AT5G44230
- UniProt
- Q9FFG8
- Pockets
- 6 · best druggability 0.76
Structure
1 distinct chain · 65% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G44230 | protein | 657 | 65% helix, 4% strand | Q9FFG8 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 930 | 0.76 | 0.79 | 75 | empty |
| 2 | 194 | 0.50 | 0.77 | 33 | empty |
| 3 | 120 | 0.41 | 0.76 | 15 | empty |
| 4 | 72 | 0.33 | 0.75 | 16 | empty |
| 5 | 53 | 0.31 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FFG8
- Elsewhere: UniProt Q9FFG8 · AlphaFold DB Q9FFG8
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