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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G39980, chloroplastic (Q9FLD8)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9FLD8
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- Pentatricopeptide repeat-containing protein AT5G39980, chloroplastic
- UniProt
- Q9FLD8
- Pockets
- 6 · best druggability 0.54
Structure
1 distinct chain · 64% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G39980, chloroplastic | protein | 678 | 64% helix, 0% strand | Q9FLD8 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 190 | 0.54 | 0.79 | 20 | empty |
| 2 | 90 | 0.49 | 0.82 | 16 | empty |
| 3 | 127 | 0.43 | 0.76 | 20 | empty |
| 4 | 60 | 0.34 | 0.77 | 13 | empty |
| 5 | 75 | 0.33 | 0.75 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FLD8
- Elsewhere: UniProt Q9FLD8 · AlphaFold DB Q9FLD8
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