Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G27270 (O04647)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- O04647
- Type
- protein
- Length
- 1,038 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9073C46348542FfE4327c3F363F9B51B22058e75
- Molecule
- Pentatricopeptide repeat-containing protein AT5G27270
- UniProt
- O04647
- Pockets
- 8 · best druggability 0.57
Structure
1 distinct chain · 68% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G27270 | protein | 1038 | 68% helix, 0% strand | O04647 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 385 | 0.57 | 0.75 | 32 | empty |
| 2 | 321 | 0.54 | 0.74 | 33 | empty |
| 3 | 176 | 0.50 | 0.77 | 20 | empty |
| 4 | 148 | 0.45 | 0.76 | 28 | empty |
| 5 | 68 | 0.45 | 0.82 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O04647
- Elsewhere: UniProt O04647 · AlphaFold DB O04647
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