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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G24830 (Q8L6Y3)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8L6Y3
- Type
- protein
- Length
- 593 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEa58c7534E5701aA8370E0fAEb19b7e14653e69c
- Molecule
- Pentatricopeptide repeat-containing protein AT5G24830
- UniProt
- Q8L6Y3
- Pockets
- 6 · best druggability 0.52
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G24830 | protein | 593 | 70% helix, 0% strand | Q8L6Y3 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 120 | 0.52 | 0.81 | 18 | empty |
| 2 | 173 | 0.46 | 0.75 | 24 | empty |
| 3 | 87 | 0.42 | 0.78 | 14 | empty |
| 4 | 109 | 0.40 | 0.76 | 24 | empty |
| 5 | 51 | 0.28 | 0.74 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8L6Y3
- Elsewhere: UniProt Q8L6Y3 · AlphaFold DB Q8L6Y3
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