Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G13770, chloroplastic (Q66GP4)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q66GP4
- Type
- protein
- Length
- 609 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf4ED13986579E8e227b3ED6c02276c648754EC27
- Molecule
- Pentatricopeptide repeat-containing protein AT5G13770, chloroplastic
- UniProt
- Q66GP4
- Pockets
- 8 · best druggability 0.70
Structure
1 distinct chain · 66% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G13770, chloroplastic | protein | 609 | 66% helix, 0% strand | Q66GP4 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.70 | 0.92 | 25 | empty |
| 2 | 329 | 0.54 | 0.75 | 39 | empty |
| 3 | 164 | 0.43 | 0.74 | 18 | empty |
| 4 | 126 | 0.38 | 0.73 | 16 | empty |
| 5 | 59 | 0.34 | 0.77 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q66GP4
- Elsewhere: UniProt Q66GP4 · AlphaFold DB Q66GP4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.