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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT5G04810, chloroplastic (Q0WMY5)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0WMY5
- Type
- protein
- Length
- 952 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x793417a5f01Ae083038547F9A7B86A2e9529e931
- Molecule
- Pentatricopeptide repeat-containing protein AT5G04810, chloroplastic
- UniProt
- Q0WMY5
- Pockets
- 6 · best druggability 0.65
Structure
1 distinct chain · 54% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT5G04810, chloroplastic | protein | 952 | 54% helix, 3% strand | Q0WMY5 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 597 | 0.65 | 0.76 | 50 | empty |
| 2 | 138 | 0.42 | 0.75 | 15 | empty |
| 3 | 72 | 0.35 | 0.76 | 12 | empty |
| 4 | 51 | 0.31 | 0.77 | 12 | empty |
| 5 | 56 | 0.28 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0WMY5
- Elsewhere: UniProt Q0WMY5 · AlphaFold DB Q0WMY5
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