Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT4G16390, chloroplastic (Q8GWE0)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8GWE0
- Type
- protein
- Length
- 702 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Pentatricopeptide repeat-containing protein AT4G16390, chloroplastic
- UniProt
- Q8GWE0
- Pockets
- 4 · best druggability 0.67
Structure
1 distinct chain · 60% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT4G16390, chloroplastic | protein | 702 | 60% helix, 3% strand | Q8GWE0 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 392 | 0.67 | 0.80 | 42 | empty |
| 2 | 292 | 0.59 | 0.78 | 27 | empty |
| 3 | 412 | 0.58 | 0.75 | 44 | empty |
| 4 | 174 | 0.45 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8GWE0
- Elsewhere: UniProt Q8GWE0 · AlphaFold DB Q8GWE0
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