Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT3G59040 (Q9LYT2)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LYT2
- Type
- protein
- Length
- 583 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x04811c5106d744526F766F547249963EBAFAB390
- Molecule
- Pentatricopeptide repeat-containing protein AT3G59040
- UniProt
- Q9LYT2
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 64% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT3G59040 | protein | 583 | 64% helix, 0% strand | Q9LYT2 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1120 | 0.75 | 0.78 | 101 | empty |
| 2 | 67 | 0.38 | 0.79 | 12 | empty |
| 3 | 60 | 0.30 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LYT2
- Elsewhere: UniProt Q9LYT2 · AlphaFold DB Q9LYT2
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