Research workbench
AlphaFold monomer V2.0 prediction for putative pentatricopeptide repeat-containing protein AT3G23330 (Q9LW63)
Analyse AlphaFold monomer V2.0 prediction for putative pentatricopeptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LW63
- Type
- protein
- Length
- 715 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA65332f6cc3AFf3C663bE680E6edCA7908A06064
- Molecule
- Putative pentatricopeptide repeat-containing protein AT3G23330
- UniProt
- Q9LW63
- Pockets
- 6 · best druggability 0.72
Structure
1 distinct chain · 64% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative pentatricopeptide repeat-containing protein AT3G23330 | protein | 715 | 64% helix, 4% strand | Q9LW63 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1083 | 0.72 | 0.76 | 90 | empty |
| 2 | 171 | 0.55 | 0.80 | 27 | empty |
| 3 | 102 | 0.41 | 0.76 | 13 | empty |
| 4 | 54 | 0.37 | 0.79 | 9 | empty |
| 5 | 51 | 0.33 | 0.78 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LW63
- Elsewhere: UniProt Q9LW63 · AlphaFold DB Q9LW63
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