Research workbench
AlphaFold monomer V2.0 prediction for putative pentatricopeptide repeat-containing protein AT3G18840 (Q9LHN5)
Analyse AlphaFold monomer V2.0 prediction for putative pentatricopeptide… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LHN5
- Type
- protein
- Length
- 678 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0D671490EE06E75975e90D7F99F73B20BE618744
- Molecule
- Putative pentatricopeptide repeat-containing protein AT3G18840
- UniProt
- Q9LHN5
- Pockets
- 6 · best druggability 0.50
Structure
1 distinct chain · 73% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative pentatricopeptide repeat-containing protein AT3G18840 | protein | 678 | 73% helix, 2% strand | Q9LHN5 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 147 | 0.50 | 0.79 | 25 | empty |
| 2 | 161 | 0.43 | 0.74 | 27 | empty |
| 3 | 163 | 0.41 | 0.73 | 25 | empty |
| 4 | 56 | 0.35 | 0.78 | 12 | empty |
| 5 | 55 | 0.33 | 0.77 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LHN5
- Elsewhere: UniProt Q9LHN5 · AlphaFold DB Q9LHN5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.