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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT3G18110, chloroplastic (Q5G1S8)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5G1S8
- Type
- protein
- Length
- 1,440 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC71436dbe7D887e0980cA8E95ea8166A2915aE95
- Molecule
- Pentatricopeptide repeat-containing protein AT3G18110, chloroplastic
- UniProt
- Q5G1S8
- Pockets
- 12 · best druggability 0.67
Structure
1 distinct chain · 65% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT3G18110, chloroplastic | protein | 1440 | 65% helix, 3% strand | Q5G1S8 |
Pockets
12 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 726 | 0.67 | 0.75 | 67 | empty |
| 2 | 94 | 0.56 | 0.85 | 23 | empty |
| 3 | 67 | 0.53 | 0.87 | 12 | empty |
| 4 | 97 | 0.50 | 0.82 | 16 | empty |
| 5 | 102 | 0.48 | 0.80 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5G1S8
- Elsewhere: UniProt Q5G1S8 · AlphaFold DB Q5G1S8
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