Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT3G13880 (Q9LRV9)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9LRV9
- Type
- protein
- Length
- 748 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0E160a0b29352d1dFD5B4Ac9c87C2d4aaC49D916
- Molecule
- Pentatricopeptide repeat-containing protein AT3G13880
- UniProt
- Q9LRV9
- Pockets
- 4 · best druggability 0.41
Structure
1 distinct chain · 69% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT3G13880 | protein | 748 | 69% helix, 2% strand | Q9LRV9 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 162 | 0.41 | 0.73 | 27 | empty |
| 2 | 65 | 0.32 | 0.75 | 10 | empty |
| 3 | 89 | 0.31 | 0.73 | 19 | empty |
| 4 | 64 | 0.29 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9LRV9
- Elsewhere: UniProt Q9LRV9 · AlphaFold DB Q9LRV9
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