Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT3G09060 (Q9SS81)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9SS81
- Type
- protein
- Length
- 687 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Pentatricopeptide repeat-containing protein AT3G09060
- UniProt
- Q9SS81
- Pockets
- 3 · best druggability 0.39
Structure
1 distinct chain · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT3G09060 | protein | 687 | 74% helix, 0% strand | Q9SS81 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 125 | 0.39 | 0.74 | 23 | empty |
| 2 | 63 | 0.33 | 0.75 | 16 | empty |
| 3 | 61 | 0.29 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SS81
- Elsewhere: UniProt Q9SS81 · AlphaFold DB Q9SS81
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