Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT2G33680 (P93005)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P93005
- Type
- protein
- Length
- 727 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Pentatricopeptide repeat-containing protein AT2G33680
- UniProt
- P93005
- Pockets
- 6 · best druggability 0.45
Structure
1 distinct chain · 70% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT2G33680 | protein | 727 | 70% helix, 2% strand | P93005 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 187 | 0.45 | 0.74 | 28 | empty |
| 2 | 126 | 0.42 | 0.76 | 23 | empty |
| 3 | 112 | 0.36 | 0.73 | 21 | empty |
| 4 | 93 | 0.36 | 0.75 | 25 | empty |
| 5 | 76 | 0.31 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P93005
- Elsewhere: UniProt P93005 · AlphaFold DB P93005
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