Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT2G19280 (Q6NKW7)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NKW7
- Type
- protein
- Length
- 693 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xF8cD1d8d93E9783063700De244A6e3cf6A195579
- Molecule
- Pentatricopeptide repeat-containing protein AT2G19280
- UniProt
- Q6NKW7
- Pockets
- 5 · best druggability 0.51
Structure
1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT2G19280 | protein | 693 | 69% helix, 0% strand | Q6NKW7 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 176 | 0.51 | 0.78 | 25 | empty |
| 2 | 232 | 0.50 | 0.75 | 23 | empty |
| 3 | 195 | 0.44 | 0.73 | 24 | empty |
| 4 | 85 | 0.38 | 0.76 | 16 | empty |
| 5 | 56 | 0.31 | 0.75 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NKW7
- Elsewhere: UniProt Q6NKW7 · AlphaFold DB Q6NKW7
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