Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT2G17140 (Q0WPZ6)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0WPZ6
- Type
- protein
- Length
- 874 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- Pentatricopeptide repeat-containing protein AT2G17140
- UniProt
- Q0WPZ6
- Pockets
- 9 · best druggability 0.57
Structure
1 distinct chain · 70% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT2G17140 | protein | 874 | 70% helix, 0% strand | Q0WPZ6 |
Pockets
9 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 303 | 0.57 | 0.77 | 37 | empty |
| 2 | 74 | 0.44 | 0.80 | 15 | empty |
| 3 | 123 | 0.39 | 0.74 | 21 | empty |
| 4 | 100 | 0.37 | 0.75 | 14 | empty |
| 5 | 62 | 0.32 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0WPZ6
- Elsewhere: UniProt Q0WPZ6 · AlphaFold DB Q0WPZ6
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