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AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT2G15820, chloroplastic (Q9XIL5)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9XIL5
- Type
- protein
- Length
- 849 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc2C3F148eB26FE91165F4EE55FE4D2E3738B0950
- Molecule
- Pentatricopeptide repeat-containing protein AT2G15820, chloroplastic
- UniProt
- Q9XIL5
- Pockets
- 5 · best druggability 0.53
Structure
1 distinct chain · 50% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT2G15820, chloroplastic | protein | 849 | 50% helix, 4% strand | Q9XIL5 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 279 | 0.53 | 0.75 | 34 | empty |
| 2 | 224 | 0.48 | 0.74 | 23 | empty |
| 3 | 108 | 0.40 | 0.76 | 17 | empty |
| 4 | 78 | 0.35 | 0.76 | 17 | empty |
| 5 | 52 | 0.25 | 0.72 | 9 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XIL5
- Elsewhere: UniProt Q9XIL5 · AlphaFold DB Q9XIL5
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