Research workbench
AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing protein AT1G74630 (Q9CA54)
Analyse AlphaFold monomer V2.0 prediction for pentatricopeptide repeat- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CA54
- Type
- protein
- Length
- 643 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4853f9898b53fc29D97B211C87020A0c7A65b1A8
- Molecule
- Pentatricopeptide repeat-containing protein AT1G74630
- UniProt
- Q9CA54
- Pockets
- 3 · best druggability 0.75
Structure
1 distinct chain · 67% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pentatricopeptide repeat-containing protein AT1G74630 | protein | 643 | 67% helix, 5% strand | Q9CA54 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1173 | 0.75 | 0.78 | 87 | empty |
| 2 | 66 | 0.40 | 0.80 | 16 | empty |
| 3 | 81 | 0.34 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CA54
- Elsewhere: UniProt Q9CA54 · AlphaFold DB Q9CA54
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