Research workbench
AlphaFold monomer V2.0 prediction for SPERMIDINE/PUTRESCINE-binding periplasmic protein 1 (P45168)
Analyse AlphaFold monomer V2.0 prediction for SPERMIDINE/PUTRESCINE-binding periplasmic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P45168
- Type
- protein
- Length
- 360 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- SPERMIDINE/PUTRESCINE-binding periplasmic protein 1
- UniProt
- P45168
- Pockets
- 2 · best druggability 0.71
Structure
1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SPERMIDINE/PUTRESCINE-binding periplasmic protein 1 | protein | 360 | 43% helix, 18% strand | P45168 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 54 | 0.71 | 0.98 | 20 | empty |
| 2 | 52 | 0.29 | 0.75 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P45168
- Elsewhere: UniProt P45168 · AlphaFold DB P45168
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